Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Npc1l1Q6T3U4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Npc1l1Q6T3U4 Gm15375-201ENSMUST00000119510 849 ntBASIC21.63■■□□□ 1.05
Npc1l1Q6T3U4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.63■■□□□ 1.05
Npc1l1Q6T3U4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Npc1l1Q6T3U4 Mir6349-201ENSMUST00000184059 97 ntBASIC21.63■■□□□ 1.05
Npc1l1Q6T3U4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Npc1l1Q6T3U4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Npc1l1Q6T3U4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1l1Q6T3U4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Mtag2-201ENSMUST00000058665 714 ntBASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1l1Q6T3U4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1l1Q6T3U4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Gm5417-201ENSMUST00000079706 384 ntBASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1l1Q6T3U4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.58■■□□□ 1.05
Npc1l1Q6T3U4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.58■■□□□ 1.04
Npc1l1Q6T3U4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Npc1l1Q6T3U4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.58■■□□□ 1.04
Npc1l1Q6T3U4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Npc1l1Q6T3U4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 Gm18025-201ENSMUST00000221733 862 ntBASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Npc1l1Q6T3U4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 155.8 ms