Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Gm9731-201ENSMUST00000209480 747 ntBASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Gm18669-201ENSMUST00000216049 778 ntBASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn10aQ6QIY3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn10aQ6QIY3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Gm27357-201ENSMUST00000183754 135 ntBASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn10aQ6QIY3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn10aQ6QIY3 Gm7153-201ENSMUST00000117092 455 ntBASIC20.53■□□□□ 0.88
Scn10aQ6QIY3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn10aQ6QIY3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn10aQ6QIY3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn10aQ6QIY3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Il3ra-202ENSMUST00000223589 738 ntBASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn10aQ6QIY3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn10aQ6QIY3 Gm7461-201ENSMUST00000058918 827 ntBASIC20.52■□□□□ 0.87
Scn10aQ6QIY3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn10aQ6QIY3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn10aQ6QIY3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn10aQ6QIY3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn10aQ6QIY3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Gm27389-201ENSMUST00000183622 195 ntBASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Gm37025-201ENSMUST00000195159 829 ntBASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn10aQ6QIY3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.49■□□□□ 0.87
Scn10aQ6QIY3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms