Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Ddx58Q6Q899 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx58Q6Q899 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.29■■□□□ 1.16
Ddx58Q6Q899 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx58Q6Q899 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.28■■□□□ 1.16
Ddx58Q6Q899 AC156016.1-201ENSMUST00000227190 1035 ntBASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Odf3b-204ENSMUST00000227834 930 ntBASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx58Q6Q899 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx58Q6Q899 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ddx58Q6Q899 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Timm23-208ENSMUST00000226683 750 ntBASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx58Q6Q899 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Ddx58Q6Q899 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ddx58Q6Q899 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Ddx58Q6Q899 Golph3-205ENSMUST00000228671 2842 ntBASIC22.25■■□□□ 1.15
Ddx58Q6Q899 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC22.25■■□□□ 1.15
Ddx58Q6Q899 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx58Q6Q899 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx58Q6Q899 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx58Q6Q899 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx58Q6Q899 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx58Q6Q899 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx58Q6Q899 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ddx58Q6Q899 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms