Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Gm12933-201ENSMUST00000120203 872 ntBASIC16.42■□□□□ 0.22
Slc6a7Q6PGE7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a7Q6PGE7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a7Q6PGE7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a7Q6PGE7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Slc6a7Q6PGE7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a7Q6PGE7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Slc6a7Q6PGE7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a7Q6PGE7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a7Q6PGE7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Slc6a7Q6PGE7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a7Q6PGE7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Gm7514-201ENSMUST00000209475 934 ntBASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a7Q6PGE7 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a7Q6PGE7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a7Q6PGE7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a7Q6PGE7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a7Q6PGE7 Fst-202ENSMUST00000223640 2612 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms