Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim45Q6PFY8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.06■□□□□ 0.32
Trim45Q6PFY8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.06■□□□□ 0.32
Trim45Q6PFY8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim45Q6PFY8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim45Q6PFY8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim45Q6PFY8 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.06■□□□□ 0.32
Trim45Q6PFY8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim45Q6PFY8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim45Q6PFY8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim45Q6PFY8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Rab3c-203ENSMUST00000224180 967 ntBASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim45Q6PFY8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Gm10653-202ENSMUST00000139570 835 ntBASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Gm20760-201ENSMUST00000179197 648 ntBASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim45Q6PFY8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Trim45Q6PFY8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim45Q6PFY8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim45Q6PFY8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim45Q6PFY8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim45Q6PFY8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim45Q6PFY8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim45Q6PFY8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim45Q6PFY8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim45Q6PFY8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim45Q6PFY8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim45Q6PFY8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim45Q6PFY8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Trim45Q6PFY8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim45Q6PFY8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim45Q6PFY8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim45Q6PFY8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim45Q6PFY8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim45Q6PFY8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim45Q6PFY8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim45Q6PFY8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim45Q6PFY8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Trim45Q6PFY8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
Trim45Q6PFY8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim45Q6PFY8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17■□□□□ 0.31
Trim45Q6PFY8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms