Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Nup98Q6PFD9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nup98Q6PFD9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup98Q6PFD9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nup98Q6PFD9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.33■■□□□ 1.01
Nup98Q6PFD9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nup98Q6PFD9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nup98Q6PFD9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nup98Q6PFD9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Nup98Q6PFD9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Nup98Q6PFD9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Nup98Q6PFD9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nup98Q6PFD9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Nup98Q6PFD9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Nup98Q6PFD9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Nup98Q6PFD9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nup98Q6PFD9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.32■■□□□ 1
Nup98Q6PFD9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup98Q6PFD9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nup98Q6PFD9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup98Q6PFD9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Nup98Q6PFD9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup98Q6PFD9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nup98Q6PFD9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nup98Q6PFD9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.32■■□□□ 1
Nup98Q6PFD9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.32■■□□□ 1
Nup98Q6PFD9 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.32■■□□□ 1
Nup98Q6PFD9 Gm29791-202ENSMUST00000207888 369 ntBASIC21.32■■□□□ 1
Nup98Q6PFD9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup98Q6PFD9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Nup98Q6PFD9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.31■■□□□ 1
Nup98Q6PFD9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup98Q6PFD9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup98Q6PFD9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nup98Q6PFD9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup98Q6PFD9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.31■■□□□ 1
Nup98Q6PFD9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Nup98Q6PFD9 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.3■■□□□ 1
Nup98Q6PFD9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Nup98Q6PFD9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.3■■□□□ 1
Nup98Q6PFD9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Golph3-205ENSMUST00000228671 2842 ntBASIC21.3■■□□□ 1
Nup98Q6PFD9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup98Q6PFD9 Gm27463-201ENSMUST00000183569 57 ntBASIC21.29■■□□□ 1
Nup98Q6PFD9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Nup98Q6PFD9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.29■■□□□ 1
Nup98Q6PFD9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms