Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf220Q6PDX6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf220Q6PDX6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rnf220Q6PDX6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf220Q6PDX6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf220Q6PDX6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf220Q6PDX6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf220Q6PDX6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rnf220Q6PDX6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf220Q6PDX6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf220Q6PDX6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17■□□□□ 0.31
Rnf220Q6PDX6 Serp2-204ENSMUST00000228055 705 ntBASIC17■□□□□ 0.31
Rnf220Q6PDX6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Rnf220Q6PDX6 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms