Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShbQ6PD21 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShbQ6PD21 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.59■□□□□ 0.73
ShbQ6PD21 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ShbQ6PD21 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
ShbQ6PD21 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShbQ6PD21 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.59■□□□□ 0.73
ShbQ6PD21 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ShbQ6PD21 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShbQ6PD21 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ShbQ6PD21 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ShbQ6PD21 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ShbQ6PD21 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ShbQ6PD21 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ShbQ6PD21 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ShbQ6PD21 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ShbQ6PD21 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ShbQ6PD21 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ShbQ6PD21 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
ShbQ6PD21 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
ShbQ6PD21 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
ShbQ6PD21 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ShbQ6PD21 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.58■□□□□ 0.72
ShbQ6PD21 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ShbQ6PD21 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ShbQ6PD21 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.57■□□□□ 0.72
ShbQ6PD21 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShbQ6PD21 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShbQ6PD21 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ShbQ6PD21 Golph3-202ENSMUST00000226517 2359 ntBASIC19.56■□□□□ 0.72
ShbQ6PD21 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ShbQ6PD21 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ShbQ6PD21 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.56■□□□□ 0.72
ShbQ6PD21 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.56■□□□□ 0.72
ShbQ6PD21 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.56■□□□□ 0.72
ShbQ6PD21 Birc2-201ENSMUST00000054878 378 ntBASIC19.56■□□□□ 0.72
ShbQ6PD21 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShbQ6PD21 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
ShbQ6PD21 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ShbQ6PD21 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShbQ6PD21 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.55■□□□□ 0.72
ShbQ6PD21 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ShbQ6PD21 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ShbQ6PD21 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ShbQ6PD21 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.55■□□□□ 0.72
ShbQ6PD21 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShbQ6PD21 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ShbQ6PD21 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.54■□□□□ 0.72
ShbQ6PD21 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShbQ6PD21 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.54■□□□□ 0.72
ShbQ6PD21 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ShbQ6PD21 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
ShbQ6PD21 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.54■□□□□ 0.72
ShbQ6PD21 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShbQ6PD21 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.54■□□□□ 0.72
ShbQ6PD21 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.54■□□□□ 0.72
ShbQ6PD21 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ShbQ6PD21 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShbQ6PD21 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ShbQ6PD21 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShbQ6PD21 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ShbQ6PD21 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShbQ6PD21 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShbQ6PD21 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ShbQ6PD21 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShbQ6PD21 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ShbQ6PD21 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShbQ6PD21 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ShbQ6PD21 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
ShbQ6PD21 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShbQ6PD21 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ShbQ6PD21 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.53■□□□□ 0.72
ShbQ6PD21 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.53■□□□□ 0.72
ShbQ6PD21 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
ShbQ6PD21 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ShbQ6PD21 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShbQ6PD21 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ShbQ6PD21 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ShbQ6PD21 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms