Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd3Q6P9Z1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.52■□□□□ 0.24
Smarcd3Q6P9Z1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd3Q6P9Z1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd3Q6P9Z1 Gm13534-201ENSMUST00000121169 513 ntBASIC16.52■□□□□ 0.24
Smarcd3Q6P9Z1 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.52■□□□□ 0.24
Smarcd3Q6P9Z1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd3Q6P9Z1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcd3Q6P9Z1 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.52■□□□□ 0.23
Smarcd3Q6P9Z1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.52■□□□□ 0.23
Smarcd3Q6P9Z1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcd3Q6P9Z1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd3Q6P9Z1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smarcd3Q6P9Z1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd3Q6P9Z1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Gm13234-201ENSMUST00000120010 747 ntBASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.48■□□□□ 0.23
Smarcd3Q6P9Z1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd3Q6P9Z1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
Smarcd3Q6P9Z1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd3Q6P9Z1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms