Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Smchd1Q6P5D8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smchd1Q6P5D8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smchd1Q6P5D8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.83■□□□□ 0.77
Smchd1Q6P5D8 Grk6-206ENSMUST00000224995 2971 ntBASIC19.83■□□□□ 0.77
Smchd1Q6P5D8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smchd1Q6P5D8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smchd1Q6P5D8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Timm23-208ENSMUST00000226683 750 ntBASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smchd1Q6P5D8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smchd1Q6P5D8 Gm7977-201ENSMUST00000193787 748 ntBASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smchd1Q6P5D8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smchd1Q6P5D8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smchd1Q6P5D8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smchd1Q6P5D8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smchd1Q6P5D8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smchd1Q6P5D8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms