Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.13■□□□□ 0.81
Abcf1Q6P542 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcf1Q6P542 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Abcf1Q6P542 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.12■□□□□ 0.81
Abcf1Q6P542 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Abcf1Q6P542 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.12■□□□□ 0.81
Abcf1Q6P542 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.12■□□□□ 0.81
Abcf1Q6P542 Gm7514-201ENSMUST00000209475 934 ntBASIC20.12■□□□□ 0.81
Abcf1Q6P542 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Abcf1Q6P542 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Abcf1Q6P542 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Abcf1Q6P542 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Abcf1Q6P542 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Abcf1Q6P542 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.11■□□□□ 0.81
Abcf1Q6P542 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.11■□□□□ 0.81
Abcf1Q6P542 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.11■□□□□ 0.81
Abcf1Q6P542 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.11■□□□□ 0.81
Abcf1Q6P542 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcf1Q6P542 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abcf1Q6P542 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Abcf1Q6P542 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abcf1Q6P542 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abcf1Q6P542 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abcf1Q6P542 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Abcf1Q6P542 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Abcf1Q6P542 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Abcf1Q6P542 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.09■□□□□ 0.81
Abcf1Q6P542 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcf1Q6P542 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Abcf1Q6P542 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Abcf1Q6P542 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Abcf1Q6P542 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Abcf1Q6P542 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
Abcf1Q6P542 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Abcf1Q6P542 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Abcf1Q6P542 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Abcf1Q6P542 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Abcf1Q6P542 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Abcf1Q6P542 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Abcf1Q6P542 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.07■□□□□ 0.8
Abcf1Q6P542 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcf1Q6P542 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms