Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Gm7290-201ENSMUST00000104990 617 ntBASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Gm12918-201ENSMUST00000120234 636 ntBASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Gm15710-201ENSMUST00000121821 636 ntBASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Gm5075-201ENSMUST00000196916 622 ntBASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sp140Q6NSQ5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sp140Q6NSQ5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sp140Q6NSQ5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sp140Q6NSQ5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sp140Q6NSQ5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sp140Q6NSQ5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sp140Q6NSQ5 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.19■□□□□ 0.5
Sp140Q6NSQ5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Sp140Q6NSQ5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sp140Q6NSQ5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.19■□□□□ 0.5
Sp140Q6NSQ5 Gm37179-201ENSMUST00000194862 823 ntBASIC18.19■□□□□ 0.5
Sp140Q6NSQ5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sp140Q6NSQ5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sp140Q6NSQ5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms