Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Gm8520-201ENSMUST00000186517 868 ntBASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg2Q6NS82 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.35■□□□□ 0.69
Retreg2Q6NS82 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.35■□□□□ 0.69
Retreg2Q6NS82 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg2Q6NS82 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg2Q6NS82 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retreg2Q6NS82 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retreg2Q6NS82 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retreg2Q6NS82 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retreg2Q6NS82 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retreg2Q6NS82 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.33■□□□□ 0.68
Retreg2Q6NS82 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg2Q6NS82 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Gm12896-201ENSMUST00000118430 226 ntBASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.32■□□□□ 0.68
Retreg2Q6NS82 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Retreg2Q6NS82 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg2Q6NS82 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg2Q6NS82 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg2Q6NS82 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg2Q6NS82 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg2Q6NS82 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms