Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Gm42642-201ENSMUST00000200683 355 ntBASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Krt39Q6IFX4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Krt39Q6IFX4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Krt39Q6IFX4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt39Q6IFX4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Krt39Q6IFX4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt39Q6IFX4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt39Q6IFX4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.89■□□□□ 0.77
Krt39Q6IFX4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt39Q6IFX4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt39Q6IFX4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Krt39Q6IFX4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt39Q6IFX4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.87■□□□□ 0.77
Krt39Q6IFX4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt39Q6IFX4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt39Q6IFX4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt39Q6IFX4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt39Q6IFX4 Gm18671-201ENSMUST00000214826 683 ntBASIC19.84■□□□□ 0.77
Krt39Q6IFX4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt39Q6IFX4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt39Q6IFX4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt39Q6IFX4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt39Q6IFX4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms