Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VclQ64727 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VclQ64727 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VclQ64727 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VclQ64727 Gm27275-201ENSMUST00000184318 272 ntBASIC17.71■□□□□ 0.43
VclQ64727 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.71■□□□□ 0.43
VclQ64727 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.71■□□□□ 0.43
VclQ64727 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VclQ64727 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VclQ64727 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
VclQ64727 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VclQ64727 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VclQ64727 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VclQ64727 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VclQ64727 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VclQ64727 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VclQ64727 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VclQ64727 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VclQ64727 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VclQ64727 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.69■□□□□ 0.42
VclQ64727 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VclQ64727 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VclQ64727 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VclQ64727 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.69■□□□□ 0.42
VclQ64727 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VclQ64727 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VclQ64727 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VclQ64727 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VclQ64727 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VclQ64727 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VclQ64727 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VclQ64727 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VclQ64727 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VclQ64727 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.68■□□□□ 0.42
VclQ64727 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VclQ64727 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VclQ64727 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VclQ64727 Gm18666-201ENSMUST00000190039 958 ntBASIC17.68■□□□□ 0.42
VclQ64727 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.68■□□□□ 0.42
VclQ64727 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VclQ64727 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VclQ64727 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
VclQ64727 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VclQ64727 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VclQ64727 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VclQ64727 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VclQ64727 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VclQ64727 Gm13168-201ENSMUST00000121771 632 ntBASIC17.67■□□□□ 0.42
VclQ64727 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.67■□□□□ 0.42
VclQ64727 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.67■□□□□ 0.42
VclQ64727 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VclQ64727 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
VclQ64727 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.67■□□□□ 0.42
VclQ64727 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
VclQ64727 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.66■□□□□ 0.42
VclQ64727 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VclQ64727 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VclQ64727 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VclQ64727 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VclQ64727 Gm11249-201ENSMUST00000117071 859 ntBASIC17.65■□□□□ 0.42
VclQ64727 Gm11927-201ENSMUST00000118472 759 ntBASIC17.65■□□□□ 0.42
VclQ64727 Gm13158-201ENSMUST00000122007 736 ntBASIC17.65■□□□□ 0.42
VclQ64727 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.65■□□□□ 0.42
VclQ64727 Zfp783-201ENSMUST00000095946 670 ntBASIC17.65■□□□□ 0.42
VclQ64727 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VclQ64727 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VclQ64727 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VclQ64727 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VclQ64727 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VclQ64727 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VclQ64727 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
VclQ64727 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
VclQ64727 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VclQ64727 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VclQ64727 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
VclQ64727 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VclQ64727 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VclQ64727 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
VclQ64727 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VclQ64727 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VclQ64727 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VclQ64727 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VclQ64727 Gm22240-201ENSMUST00000175225 82 ntBASIC17.64■□□□□ 0.41
VclQ64727 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VclQ64727 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
VclQ64727 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VclQ64727 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VclQ64727 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VclQ64727 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VclQ64727 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VclQ64727 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms