Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm8587-201ENSMUST00000076538 843 ntBASIC17.1■□□□□ 0.33
AtmQ62388 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AtmQ62388 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AtmQ62388 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AtmQ62388 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AtmQ62388 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AtmQ62388 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AtmQ62388 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AtmQ62388 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AtmQ62388 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
AtmQ62388 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AtmQ62388 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
AtmQ62388 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AtmQ62388 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
AtmQ62388 Gm7791-201ENSMUST00000219066 539 ntBASIC17.08■□□□□ 0.32
AtmQ62388 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AtmQ62388 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AtmQ62388 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AtmQ62388 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.07■□□□□ 0.32
AtmQ62388 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AtmQ62388 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AtmQ62388 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AtmQ62388 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AtmQ62388 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AtmQ62388 Gm38285-201ENSMUST00000192928 922 ntBASIC17.07■□□□□ 0.32
AtmQ62388 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AtmQ62388 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AtmQ62388 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.07■□□□□ 0.32
AtmQ62388 Gm2274-201ENSMUST00000184539 609 ntBASIC17.07■□□□□ 0.32
AtmQ62388 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.07■□□□□ 0.32
AtmQ62388 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AtmQ62388 Birc2-201ENSMUST00000054878 378 ntBASIC17.07■□□□□ 0.32
AtmQ62388 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AtmQ62388 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 Gm37935-201ENSMUST00000192012 982 ntBASIC17.06■□□□□ 0.32
AtmQ62388 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.06■□□□□ 0.32
AtmQ62388 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
AtmQ62388 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
AtmQ62388 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.06■□□□□ 0.32
AtmQ62388 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AtmQ62388 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.06■□□□□ 0.32
AtmQ62388 Notumos-201ENSMUST00000151998 2659 ntBASIC17.06■□□□□ 0.32
AtmQ62388 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
AtmQ62388 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AtmQ62388 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AtmQ62388 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AtmQ62388 Gm27459-201ENSMUST00000184860 107 ntBASIC17.04■□□□□ 0.32
AtmQ62388 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AtmQ62388 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AtmQ62388 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
AtmQ62388 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AtmQ62388 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AtmQ62388 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.04■□□□□ 0.32
AtmQ62388 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AtmQ62388 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AtmQ62388 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AtmQ62388 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AtmQ62388 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AtmQ62388 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AtmQ62388 Gm18958-201ENSMUST00000174258 762 ntBASIC17.03■□□□□ 0.32
AtmQ62388 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
AtmQ62388 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AtmQ62388 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AtmQ62388 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
AtmQ62388 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.03■□□□□ 0.32
AtmQ62388 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AtmQ62388 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Gm21559-201ENSMUST00000220638 855 ntBASIC17.02■□□□□ 0.32
AtmQ62388 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.02■□□□□ 0.32
AtmQ62388 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AtmQ62388 Gm9013-201ENSMUST00000132939 882 ntBASIC17.02■□□□□ 0.32
AtmQ62388 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms