Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six2Q62232 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six2Q62232 Zfp783-201ENSMUST00000095946 670 ntBASIC19.21■□□□□ 0.67
Six2Q62232 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Six2Q62232 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six2Q62232 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six2Q62232 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six2Q62232 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.2■□□□□ 0.66
Six2Q62232 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.2■□□□□ 0.66
Six2Q62232 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.2■□□□□ 0.66
Six2Q62232 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.2■□□□□ 0.66
Six2Q62232 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Six2Q62232 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Six2Q62232 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Six2Q62232 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six2Q62232 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.19■□□□□ 0.66
Six2Q62232 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.19■□□□□ 0.66
Six2Q62232 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.19■□□□□ 0.66
Six2Q62232 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.19■□□□□ 0.66
Six2Q62232 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Six2Q62232 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.19■□□□□ 0.66
Six2Q62232 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six2Q62232 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Six2Q62232 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Six2Q62232 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Six2Q62232 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Six2Q62232 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Six2Q62232 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six2Q62232 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Six2Q62232 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.17■□□□□ 0.66
Six2Q62232 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.17■□□□□ 0.66
Six2Q62232 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.17■□□□□ 0.66
Six2Q62232 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.17■□□□□ 0.66
Six2Q62232 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six2Q62232 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.16■□□□□ 0.66
Six2Q62232 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.16■□□□□ 0.66
Six2Q62232 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.16■□□□□ 0.66
Six2Q62232 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.16■□□□□ 0.66
Six2Q62232 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Six2Q62232 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six2Q62232 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six2Q62232 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Six2Q62232 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms