Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm17808-201ENSMUST00000200859 894 ntBASIC16.99■□□□□ 0.31
VcanQ62059 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.99■□□□□ 0.31
VcanQ62059 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.99■□□□□ 0.31
VcanQ62059 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VcanQ62059 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.98■□□□□ 0.31
VcanQ62059 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.98■□□□□ 0.31
VcanQ62059 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VcanQ62059 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VcanQ62059 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VcanQ62059 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.98■□□□□ 0.31
VcanQ62059 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VcanQ62059 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VcanQ62059 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VcanQ62059 Gm38027-201ENSMUST00000192315 235 ntBASIC16.98■□□□□ 0.31
VcanQ62059 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.98■□□□□ 0.31
VcanQ62059 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
VcanQ62059 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.97■□□□□ 0.31
VcanQ62059 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VcanQ62059 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
VcanQ62059 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.97■□□□□ 0.31
VcanQ62059 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VcanQ62059 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VcanQ62059 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VcanQ62059 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.96■□□□□ 0.31
VcanQ62059 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VcanQ62059 Gm7370-201ENSMUST00000219471 767 ntBASIC16.96■□□□□ 0.31
VcanQ62059 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.96■□□□□ 0.31
VcanQ62059 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.96■□□□□ 0.31
VcanQ62059 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.96■□□□□ 0.31
VcanQ62059 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VcanQ62059 Zfp783-201ENSMUST00000095946 670 ntBASIC16.96■□□□□ 0.31
VcanQ62059 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VcanQ62059 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.96■□□□□ 0.31
VcanQ62059 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.96■□□□□ 0.31
VcanQ62059 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.95■□□□□ 0.3
VcanQ62059 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VcanQ62059 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
VcanQ62059 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.95■□□□□ 0.3
VcanQ62059 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VcanQ62059 Gm11594-201ENSMUST00000122313 162 ntBASIC16.95■□□□□ 0.3
VcanQ62059 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.95■□□□□ 0.3
VcanQ62059 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 Gm13884-201ENSMUST00000118103 829 ntBASIC16.94■□□□□ 0.3
VcanQ62059 Gm11950-201ENSMUST00000121615 838 ntBASIC16.94■□□□□ 0.3
VcanQ62059 Auts2-212ENSMUST00000178555 309 ntBASIC16.94■□□□□ 0.3
VcanQ62059 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VcanQ62059 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
VcanQ62059 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VcanQ62059 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.94■□□□□ 0.3
VcanQ62059 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VcanQ62059 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VcanQ62059 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VcanQ62059 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VcanQ62059 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VcanQ62059 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
VcanQ62059 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.93■□□□□ 0.3
VcanQ62059 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.93■□□□□ 0.3
VcanQ62059 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms