Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.19■□□□□ 0.98
Ctr9Q62018 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ctr9Q62018 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.18■□□□□ 0.98
Ctr9Q62018 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ctr9Q62018 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.18■□□□□ 0.98
Ctr9Q62018 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.18■□□□□ 0.98
Ctr9Q62018 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctr9Q62018 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ctr9Q62018 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctr9Q62018 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctr9Q62018 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctr9Q62018 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctr9Q62018 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.17■□□□□ 0.98
Ctr9Q62018 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.17■□□□□ 0.98
Ctr9Q62018 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ctr9Q62018 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctr9Q62018 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctr9Q62018 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctr9Q62018 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Ctr9Q62018 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.16■□□□□ 0.98
Ctr9Q62018 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.16■□□□□ 0.98
Ctr9Q62018 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ctr9Q62018 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.16■□□□□ 0.98
Ctr9Q62018 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Ctr9Q62018 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.16■□□□□ 0.98
Ctr9Q62018 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctr9Q62018 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctr9Q62018 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ctr9Q62018 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ctr9Q62018 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctr9Q62018 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.15■□□□□ 0.98
Ctr9Q62018 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ctr9Q62018 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.15■□□□□ 0.98
Ctr9Q62018 Gm42545-201ENSMUST00000202755 922 ntBASIC21.15■□□□□ 0.98
Ctr9Q62018 Gm18025-201ENSMUST00000221733 862 ntBASIC21.15■□□□□ 0.98
Ctr9Q62018 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctr9Q62018 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ctr9Q62018 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctr9Q62018 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctr9Q62018 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ctr9Q62018 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ctr9Q62018 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ctr9Q62018 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.14■□□□□ 0.98
Ctr9Q62018 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ctr9Q62018 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ctr9Q62018 Gm43183-201ENSMUST00000200632 547 ntBASIC21.14■□□□□ 0.97
Ctr9Q62018 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ctr9Q62018 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ctr9Q62018 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ctr9Q62018 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.14■□□□□ 0.97
Ctr9Q62018 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ctr9Q62018 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ctr9Q62018 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ctr9Q62018 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ctr9Q62018 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ctr9Q62018 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.13■□□□□ 0.97
Ctr9Q62018 Mir1199-201ENSMUST00000117015 119 ntBASIC21.13■□□□□ 0.97
Ctr9Q62018 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.13■□□□□ 0.97
Ctr9Q62018 Gm6576-201ENSMUST00000169678 883 ntBASIC21.13■□□□□ 0.97
Ctr9Q62018 Mir6349-201ENSMUST00000184059 97 ntBASIC21.13■□□□□ 0.97
Ctr9Q62018 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ctr9Q62018 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ctr9Q62018 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ctr9Q62018 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.13■□□□□ 0.97
Ctr9Q62018 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Ctr9Q62018 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ctr9Q62018 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ctr9Q62018 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ctr9Q62018 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.12■□□□□ 0.97
Ctr9Q62018 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ctr9Q62018 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ctr9Q62018 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ctr9Q62018 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.12■□□□□ 0.97
Ctr9Q62018 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ctr9Q62018 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.12■□□□□ 0.97
Ctr9Q62018 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.12■□□□□ 0.97
Ctr9Q62018 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.12■□□□□ 0.97
Ctr9Q62018 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ctr9Q62018 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ctr9Q62018 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms