Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx2Q61412 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vsx2Q61412 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vsx2Q61412 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
Vsx2Q61412 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx2Q61412 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.55■□□□□ 0.4
Vsx2Q61412 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx2Q61412 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx2Q61412 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx2Q61412 Gm12441-201ENSMUST00000121806 588 ntBASIC17.55■□□□□ 0.4
Vsx2Q61412 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vsx2Q61412 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx2Q61412 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vsx2Q61412 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.55■□□□□ 0.4
Vsx2Q61412 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.55■□□□□ 0.4
Vsx2Q61412 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx2Q61412 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx2Q61412 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx2Q61412 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx2Q61412 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx2Q61412 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vsx2Q61412 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.54■□□□□ 0.4
Vsx2Q61412 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.54■□□□□ 0.4
Vsx2Q61412 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.54■□□□□ 0.4
Vsx2Q61412 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Vsx2Q61412 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx2Q61412 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.53■□□□□ 0.4
Vsx2Q61412 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.53■□□□□ 0.4
Vsx2Q61412 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vsx2Q61412 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.53■□□□□ 0.4
Vsx2Q61412 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.53■□□□□ 0.4
Vsx2Q61412 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.53■□□□□ 0.4
Vsx2Q61412 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.53■□□□□ 0.4
Vsx2Q61412 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vsx2Q61412 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx2Q61412 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.53■□□□□ 0.4
Vsx2Q61412 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vsx2Q61412 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.52■□□□□ 0.4
Vsx2Q61412 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.52■□□□□ 0.4
Vsx2Q61412 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Gm26524-201ENSMUST00000192339 390 ntBASIC17.52■□□□□ 0.4
Vsx2Q61412 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.52■□□□□ 0.4
Vsx2Q61412 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx2Q61412 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vsx2Q61412 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Vsx2Q61412 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Vsx2Q61412 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.51■□□□□ 0.39
Vsx2Q61412 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.51■□□□□ 0.39
Vsx2Q61412 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.51■□□□□ 0.39
Vsx2Q61412 Rab3c-203ENSMUST00000224180 967 ntBASIC17.51■□□□□ 0.39
Vsx2Q61412 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vsx2Q61412 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx2Q61412 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms