Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Traf4Q61382 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.91■□□□□ 0.14
Traf4Q61382 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Traf4Q61382 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Traf4Q61382 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Traf4Q61382 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Traf4Q61382 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Traf4Q61382 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Traf4Q61382 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.91■□□□□ 0.14
Traf4Q61382 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Traf4Q61382 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Traf4Q61382 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.9■□□□□ 0.14
Traf4Q61382 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.9■□□□□ 0.14
Traf4Q61382 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.9■□□□□ 0.14
Traf4Q61382 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Traf4Q61382 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.9■□□□□ 0.14
Traf4Q61382 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.89■□□□□ 0.13
Traf4Q61382 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.89■□□□□ 0.13
Traf4Q61382 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Traf4Q61382 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Traf4Q61382 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.89■□□□□ 0.13
Traf4Q61382 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.89■□□□□ 0.13
Traf4Q61382 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Traf4Q61382 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Traf4Q61382 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.88■□□□□ 0.13
Traf4Q61382 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.88■□□□□ 0.13
Traf4Q61382 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Trmt13-210ENSMUST00000198454 880 ntBASIC15.88■□□□□ 0.13
Traf4Q61382 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.88■□□□□ 0.13
Traf4Q61382 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Traf4Q61382 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.88■□□□□ 0.13
Traf4Q61382 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Traf4Q61382 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.87■□□□□ 0.13
Traf4Q61382 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Traf4Q61382 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Traf4Q61382 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Traf4Q61382 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Traf4Q61382 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.87■□□□□ 0.13
Traf4Q61382 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Traf4Q61382 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Traf4Q61382 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Traf4Q61382 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.86■□□□□ 0.13
Traf4Q61382 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Traf4Q61382 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Traf4Q61382 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Traf4Q61382 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Traf4Q61382 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Traf4Q61382 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Traf4Q61382 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.86■□□□□ 0.13
Traf4Q61382 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.86■□□□□ 0.13
Traf4Q61382 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.86■□□□□ 0.13
Traf4Q61382 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Traf4Q61382 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms