Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Mir5130-201ENSMUST00000175160 84 ntBASIC15.17■□□□□ 0.02
Hcfc1Q61191 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.17■□□□□ 0.02
Hcfc1Q61191 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Notumos-201ENSMUST00000151998 2659 ntBASIC15.17■□□□□ 0.02
Hcfc1Q61191 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.16■□□□□ 0.02
Hcfc1Q61191 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Gm10418-201ENSMUST00000100943 576 ntBASIC15.16■□□□□ 0.02
Hcfc1Q61191 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcfc1Q61191 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Mir1668-201ENSMUST00000184114 107 ntBASIC15.15■□□□□ 0.02
Hcfc1Q61191 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcfc1Q61191 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.14■□□□□ 0.01
Hcfc1Q61191 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Gm25016-201ENSMUST00000158399 131 ntBASIC15.14■□□□□ 0.01
Hcfc1Q61191 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcfc1Q61191 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcfc1Q61191 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.13■□□□□ 0.01
Hcfc1Q61191 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Gm28033-201ENSMUST00000184224 96 ntBASIC15.13■□□□□ 0.01
Hcfc1Q61191 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.13■□□□□ 0.01
Hcfc1Q61191 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.13■□□□□ 0.01
Hcfc1Q61191 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcfc1Q61191 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.12■□□□□ 0.01
Hcfc1Q61191 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Gm7638-201ENSMUST00000121348 967 ntBASIC15.12■□□□□ 0.01
Hcfc1Q61191 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Gm17661-201ENSMUST00000170317 270 ntBASIC15.12■□□□□ 0.01
Hcfc1Q61191 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Gm27704-201ENSMUST00000185094 107 ntBASIC15.12■□□□□ 0.01
Hcfc1Q61191 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms