Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clns1aQ61189 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clns1aQ61189 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clns1aQ61189 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Clns1aQ61189 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Clns1aQ61189 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clns1aQ61189 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clns1aQ61189 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clns1aQ61189 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clns1aQ61189 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Clns1aQ61189 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Clns1aQ61189 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Clns1aQ61189 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Clns1aQ61189 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Gm9959-201ENSMUST00000068277 390 ntBASIC15.41■□□□□ 0.06
Clns1aQ61189 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clns1aQ61189 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Clns1aQ61189 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.4■□□□□ 0.06
Clns1aQ61189 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clns1aQ61189 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clns1aQ61189 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clns1aQ61189 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clns1aQ61189 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clns1aQ61189 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.4■□□□□ 0.06
Clns1aQ61189 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.4■□□□□ 0.06
Clns1aQ61189 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Clns1aQ61189 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clns1aQ61189 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clns1aQ61189 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clns1aQ61189 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Clns1aQ61189 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.39■□□□□ 0.05
Clns1aQ61189 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Gm8969-201ENSMUST00000199694 526 ntBASIC15.39■□□□□ 0.05
Clns1aQ61189 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.39■□□□□ 0.05
Clns1aQ61189 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clns1aQ61189 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Clns1aQ61189 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Clns1aQ61189 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Clns1aQ61189 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Clns1aQ61189 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Clns1aQ61189 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Clns1aQ61189 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.38■□□□□ 0.05
Clns1aQ61189 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Clns1aQ61189 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clns1aQ61189 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.37■□□□□ 0.05
Clns1aQ61189 Golgb1-201ENSMUST00000023534 498 ntBASIC15.37■□□□□ 0.05
Clns1aQ61189 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clns1aQ61189 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms