Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Sdf4Q61112 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.28■□□□□ 0.52
Sdf4Q61112 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sdf4Q61112 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sdf4Q61112 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.27■□□□□ 0.52
Sdf4Q61112 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Sdf4Q61112 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.27■□□□□ 0.52
Sdf4Q61112 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.27■□□□□ 0.52
Sdf4Q61112 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.27■□□□□ 0.52
Sdf4Q61112 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.27■□□□□ 0.52
Sdf4Q61112 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdf4Q61112 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdf4Q61112 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sdf4Q61112 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdf4Q61112 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdf4Q61112 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdf4Q61112 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdf4Q61112 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdf4Q61112 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdf4Q61112 Tgds-204ENSMUST00000228543 1594 ntBASIC18.26■□□□□ 0.51
Sdf4Q61112 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdf4Q61112 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdf4Q61112 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Sdf4Q61112 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Sdf4Q61112 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sdf4Q61112 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.26■□□□□ 0.51
Sdf4Q61112 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdf4Q61112 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sdf4Q61112 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.26■□□□□ 0.51
Sdf4Q61112 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdf4Q61112 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdf4Q61112 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdf4Q61112 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.26■□□□□ 0.51
Sdf4Q61112 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdf4Q61112 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdf4Q61112 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sdf4Q61112 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.25■□□□□ 0.51
Sdf4Q61112 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.25■□□□□ 0.51
Sdf4Q61112 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.25■□□□□ 0.51
Sdf4Q61112 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sdf4Q61112 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Sdf4Q61112 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.25■□□□□ 0.51
Sdf4Q61112 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Sdf4Q61112 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdf4Q61112 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sdf4Q61112 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdf4Q61112 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.24■□□□□ 0.51
Sdf4Q61112 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.24■□□□□ 0.51
Sdf4Q61112 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 Gm4968-201ENSMUST00000071458 858 ntBASIC18.24■□□□□ 0.51
Sdf4Q61112 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.24■□□□□ 0.51
Sdf4Q61112 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sdf4Q61112 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.24■□□□□ 0.51
Sdf4Q61112 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdf4Q61112 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sdf4Q61112 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sdf4Q61112 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Flg-201ENSMUST00000050758 1488 ntBASIC18.23■□□□□ 0.51
Sdf4Q61112 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.23■□□□□ 0.51
Sdf4Q61112 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms