Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sim2Q61079 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sim2Q61079 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sim2Q61079 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sim2Q61079 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sim2Q61079 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.58■□□□□ 0.4
Sim2Q61079 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.58■□□□□ 0.4
Sim2Q61079 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sim2Q61079 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sim2Q61079 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sim2Q61079 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sim2Q61079 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sim2Q61079 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Sim2Q61079 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.58■□□□□ 0.4
Sim2Q61079 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sim2Q61079 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sim2Q61079 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Sim2Q61079 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.57■□□□□ 0.4
Sim2Q61079 Gm38027-201ENSMUST00000192315 235 ntBASIC17.57■□□□□ 0.4
Sim2Q61079 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sim2Q61079 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sim2Q61079 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sim2Q61079 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sim2Q61079 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.57■□□□□ 0.4
Sim2Q61079 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sim2Q61079 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.57■□□□□ 0.4
Sim2Q61079 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sim2Q61079 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Sim2Q61079 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sim2Q61079 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sim2Q61079 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.56■□□□□ 0.4
Sim2Q61079 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Sim2Q61079 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.56■□□□□ 0.4
Sim2Q61079 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sim2Q61079 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sim2Q61079 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sim2Q61079 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sim2Q61079 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sim2Q61079 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sim2Q61079 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sim2Q61079 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sim2Q61079 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sim2Q61079 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sim2Q61079 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sim2Q61079 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sim2Q61079 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sim2Q61079 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.55■□□□□ 0.4
Sim2Q61079 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.55■□□□□ 0.4
Sim2Q61079 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sim2Q61079 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sim2Q61079 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sim2Q61079 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sim2Q61079 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sim2Q61079 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sim2Q61079 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sim2Q61079 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.54■□□□□ 0.4
Sim2Q61079 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.54■□□□□ 0.4
Sim2Q61079 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.54■□□□□ 0.4
Sim2Q61079 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sim2Q61079 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sim2Q61079 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sim2Q61079 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.53■□□□□ 0.4
Sim2Q61079 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sim2Q61079 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sim2Q61079 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.53■□□□□ 0.4
Sim2Q61079 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.53■□□□□ 0.4
Sim2Q61079 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.53■□□□□ 0.4
Sim2Q61079 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sim2Q61079 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sim2Q61079 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sim2Q61079 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.52■□□□□ 0.4
Sim2Q61079 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.52■□□□□ 0.4
Sim2Q61079 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.52■□□□□ 0.4
Sim2Q61079 Gm27704-201ENSMUST00000185094 107 ntBASIC17.52■□□□□ 0.4
Sim2Q61079 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sim2Q61079 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Sim2Q61079 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sim2Q61079 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.52■□□□□ 0.39
Sim2Q61079 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sim2Q61079 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sim2Q61079 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms