Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfaip3Q60769 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfaip3Q60769 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfaip3Q60769 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tnfaip3Q60769 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tnfaip3Q60769 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfaip3Q60769 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Grk6-206ENSMUST00000224995 2971 ntBASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.88■□□□□ 0.29
Tnfaip3Q60769 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Gm15378-201ENSMUST00000121894 207 ntBASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Gm10138-203ENSMUST00000206952 366 ntBASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Mtag2-201ENSMUST00000058665 714 ntBASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfaip3Q60769 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.86■□□□□ 0.29
Tnfaip3Q60769 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfaip3Q60769 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfaip3Q60769 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms