Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.27■□□□□ 0.36
ClpbQ60649 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.27■□□□□ 0.36
ClpbQ60649 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.27■□□□□ 0.36
ClpbQ60649 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ClpbQ60649 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClpbQ60649 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ClpbQ60649 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ClpbQ60649 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ClpbQ60649 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ClpbQ60649 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ClpbQ60649 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClpbQ60649 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.27■□□□□ 0.35
ClpbQ60649 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClpbQ60649 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
ClpbQ60649 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClpbQ60649 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.27■□□□□ 0.35
ClpbQ60649 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.26■□□□□ 0.35
ClpbQ60649 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ClpbQ60649 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ClpbQ60649 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ClpbQ60649 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.26■□□□□ 0.35
ClpbQ60649 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.26■□□□□ 0.35
ClpbQ60649 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ClpbQ60649 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.26■□□□□ 0.35
ClpbQ60649 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpbQ60649 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ClpbQ60649 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClpbQ60649 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpbQ60649 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpbQ60649 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpbQ60649 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpbQ60649 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpbQ60649 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpbQ60649 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpbQ60649 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClpbQ60649 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
ClpbQ60649 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ClpbQ60649 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.24■□□□□ 0.35
ClpbQ60649 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.24■□□□□ 0.35
ClpbQ60649 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpbQ60649 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ClpbQ60649 Fst-202ENSMUST00000223640 2612 ntBASIC17.23■□□□□ 0.35
ClpbQ60649 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.23■□□□□ 0.35
ClpbQ60649 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ClpbQ60649 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.23■□□□□ 0.35
ClpbQ60649 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.23■□□□□ 0.35
ClpbQ60649 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ClpbQ60649 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.23■□□□□ 0.35
ClpbQ60649 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpbQ60649 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.22■□□□□ 0.35
ClpbQ60649 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpbQ60649 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpbQ60649 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.22■□□□□ 0.35
ClpbQ60649 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClpbQ60649 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ClpbQ60649 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpbQ60649 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpbQ60649 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpbQ60649 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.22■□□□□ 0.35
ClpbQ60649 Gm20760-201ENSMUST00000179197 648 ntBASIC17.22■□□□□ 0.35
ClpbQ60649 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.22■□□□□ 0.35
ClpbQ60649 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.22■□□□□ 0.35
ClpbQ60649 Gm20049-201ENSMUST00000219950 730 ntBASIC17.22■□□□□ 0.35
ClpbQ60649 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ClpbQ60649 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpbQ60649 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms