Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h4Q60641 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h4Q60641 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nr1h4Q60641 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.17■□□□□ 0.34
Nr1h4Q60641 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h4Q60641 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h4Q60641 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h4Q60641 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h4Q60641 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.16■□□□□ 0.34
Nr1h4Q60641 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Gm8969-201ENSMUST00000199694 526 ntBASIC17.16■□□□□ 0.34
Nr1h4Q60641 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.16■□□□□ 0.34
Nr1h4Q60641 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.16■□□□□ 0.34
Nr1h4Q60641 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Fst-202ENSMUST00000223640 2612 ntBASIC17.16■□□□□ 0.34
Nr1h4Q60641 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h4Q60641 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.15■□□□□ 0.34
Nr1h4Q60641 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Gm43060-201ENSMUST00000200621 289 ntBASIC17.15■□□□□ 0.34
Nr1h4Q60641 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nr1h4Q60641 Tgds-204ENSMUST00000228543 1594 ntBASIC17.15■□□□□ 0.34
Nr1h4Q60641 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nr1h4Q60641 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nr1h4Q60641 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nr1h4Q60641 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nr1h4Q60641 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Gm43017-201ENSMUST00000198296 752 ntBASIC17.13■□□□□ 0.33
Nr1h4Q60641 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nr1h4Q60641 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h4Q60641 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nr1h4Q60641 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h4Q60641 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h4Q60641 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms