Protein–RNA interactions for Protein: Q5SV66

Ccdc42, Coiled-coil domain-containing protein 42, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42Q5SV66 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc42Q5SV66 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc42Q5SV66 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Gm43060-201ENSMUST00000200621 289 ntBASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Gm45417-201ENSMUST00000209533 758 ntBASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc42Q5SV66 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc42Q5SV66 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc42Q5SV66 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Ccdc42Q5SV66 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc42Q5SV66 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc42Q5SV66 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc42Q5SV66 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc42Q5SV66 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc42Q5SV66 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms