Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ctc1Q5SUQ9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.08■□□□□ 0.65
Ctc1Q5SUQ9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ctc1Q5SUQ9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.08■□□□□ 0.64
Ctc1Q5SUQ9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ctc1Q5SUQ9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.08■□□□□ 0.64
Ctc1Q5SUQ9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ctc1Q5SUQ9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ctc1Q5SUQ9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ctc1Q5SUQ9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctc1Q5SUQ9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.06■□□□□ 0.64
Ctc1Q5SUQ9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctc1Q5SUQ9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Gm7977-201ENSMUST00000193787 748 ntBASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctc1Q5SUQ9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Gm12896-201ENSMUST00000118430 226 ntBASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Gm27275-201ENSMUST00000184318 272 ntBASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ctc1Q5SUQ9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctc1Q5SUQ9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctc1Q5SUQ9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ctc1Q5SUQ9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ctc1Q5SUQ9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.02■□□□□ 0.64
Ctc1Q5SUQ9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctc1Q5SUQ9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.02■□□□□ 0.64
Ctc1Q5SUQ9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ctc1Q5SUQ9 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.02■□□□□ 0.63
Ctc1Q5SUQ9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ctc1Q5SUQ9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ctc1Q5SUQ9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Ctc1Q5SUQ9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms