Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Gm10231-201ENSMUST00000181584 441 ntBASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Gm10175-202ENSMUST00000208752 441 ntBASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-2Q5R1I4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-2Q5R1I4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav6-2Q5R1I4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-2Q5R1I4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Gm3375-201ENSMUST00000203929 796 ntBASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav6-2Q5R1I4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-2Q5R1I4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Gm11539-201ENSMUST00000119837 557 ntBASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Gm13436-201ENSMUST00000120418 567 ntBASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Gm13559-201ENSMUST00000120476 863 ntBASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-2Q5R1I4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-2Q5R1I4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms