Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Reep4-203ENSMUST00000226563 1444 ntBASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Gm13234-201ENSMUST00000120010 747 ntBASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-3Q5R1I1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Gm13534-201ENSMUST00000121169 513 ntBASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-3Q5R1I1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav7d-3Q5R1I1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Gm42778-201ENSMUST00000199644 553 ntBASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-3Q5R1I1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms