Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf20Q5DTM8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 Gm26524-201ENSMUST00000192339 390 ntBASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf20Q5DTM8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf20Q5DTM8 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Gm44549-201ENSMUST00000208351 577 ntBASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf20Q5DTM8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Gm2399-201ENSMUST00000104944 225 ntBASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Rab3c-203ENSMUST00000224180 967 ntBASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf20Q5DTM8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf20Q5DTM8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf20Q5DTM8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf20Q5DTM8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
Rnf20Q5DTM8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms