Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Usp13Q5BKP2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Usp13Q5BKP2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Usp13Q5BKP2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Usp13Q5BKP2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Usp13Q5BKP2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Tgds-204ENSMUST00000228543 1594 ntBASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Gm26524-201ENSMUST00000192339 390 ntBASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp13Q5BKP2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Usp13Q5BKP2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Mir7071-201ENSMUST00000184847 69 ntBASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp13Q5BKP2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Usp13Q5BKP2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp13Q5BKP2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp13Q5BKP2 Rab3c-203ENSMUST00000224180 967 ntBASIC20.23■□□□□ 0.83
Usp13Q5BKP2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp13Q5BKP2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp13Q5BKP2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp13Q5BKP2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp13Q5BKP2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Usp13Q5BKP2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Usp13Q5BKP2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms