Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn2bQ56A07 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Scn2bQ56A07 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn2bQ56A07 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn2bQ56A07 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn2bQ56A07 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Scn2bQ56A07 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.83■□□□□ 0.44
Scn2bQ56A07 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.83■□□□□ 0.44
Scn2bQ56A07 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.83■□□□□ 0.44
Scn2bQ56A07 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn2bQ56A07 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Scn2bQ56A07 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Scn2bQ56A07 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.8■□□□□ 0.44
Scn2bQ56A07 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn2bQ56A07 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2bQ56A07 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.79■□□□□ 0.44
Scn2bQ56A07 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn2bQ56A07 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2bQ56A07 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Scn2bQ56A07 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms