Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Srrm1Q52KI8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Srrm1Q52KI8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.18■□□□□ 0.82
Srrm1Q52KI8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Mir6349-201ENSMUST00000184059 97 ntBASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm1Q52KI8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm1Q52KI8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srrm1Q52KI8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Srrm1Q52KI8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.14■□□□□ 0.82
Srrm1Q52KI8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Gm7284-201ENSMUST00000131667 944 ntBASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Srrm1Q52KI8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Gm7461-201ENSMUST00000058918 827 ntBASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Iqck-206ENSMUST00000208658 2891 ntBASIC20.13■□□□□ 0.81
Srrm1Q52KI8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Srrm1Q52KI8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms