Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Grk6-206ENSMUST00000224995 2971 ntBASIC19.43■□□□□ 0.7
R3hdm4Q4VBF2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
R3hdm4Q4VBF2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3hdm4Q4VBF2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3hdm4Q4VBF2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3hdm4Q4VBF2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
R3hdm4Q4VBF2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3hdm4Q4VBF2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
R3hdm4Q4VBF2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.43■□□□□ 0.7
R3hdm4Q4VBF2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3hdm4Q4VBF2 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Gm13158-201ENSMUST00000122007 736 ntBASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3hdm4Q4VBF2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
R3hdm4Q4VBF2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.4■□□□□ 0.7
R3hdm4Q4VBF2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3hdm4Q4VBF2 Gm5643-201ENSMUST00000117081 966 ntBASIC19.4■□□□□ 0.7
R3hdm4Q4VBF2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.4■□□□□ 0.7
R3hdm4Q4VBF2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3hdm4Q4VBF2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
R3hdm4Q4VBF2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.39■□□□□ 0.7
R3hdm4Q4VBF2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3hdm4Q4VBF2 Gm13168-201ENSMUST00000121771 632 ntBASIC19.39■□□□□ 0.69
R3hdm4Q4VBF2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.39■□□□□ 0.69
R3hdm4Q4VBF2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.39■□□□□ 0.69
R3hdm4Q4VBF2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.39■□□□□ 0.69
R3hdm4Q4VBF2 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.39■□□□□ 0.69
R3hdm4Q4VBF2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
R3hdm4Q4VBF2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Mir2861-201ENSMUST00000175539 82 ntBASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3hdm4Q4VBF2 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Gm10138-203ENSMUST00000206952 366 ntBASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3hdm4Q4VBF2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms