Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Prpf38aQ4FK66 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38aQ4FK66 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38aQ4FK66 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38aQ4FK66 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Prpf38aQ4FK66 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Prpf38aQ4FK66 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.01■□□□□ 0.95
Prpf38aQ4FK66 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Prpf38aQ4FK66 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Prpf38aQ4FK66 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38aQ4FK66 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21■□□□□ 0.95
Prpf38aQ4FK66 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf38aQ4FK66 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21■□□□□ 0.95
Prpf38aQ4FK66 Gm21814-202ENSMUST00000203277 873 ntBASIC21■□□□□ 0.95
Prpf38aQ4FK66 AC158538.1-201ENSMUST00000225870 294 ntBASIC21■□□□□ 0.95
Prpf38aQ4FK66 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prpf38aQ4FK66 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf38aQ4FK66 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf38aQ4FK66 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf38aQ4FK66 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf38aQ4FK66 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Gm5417-201ENSMUST00000079706 384 ntBASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38aQ4FK66 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Prpf38aQ4FK66 Tgds-204ENSMUST00000228543 1594 ntBASIC20.98■□□□□ 0.95
Prpf38aQ4FK66 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38aQ4FK66 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.98■□□□□ 0.95
Prpf38aQ4FK66 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38aQ4FK66 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38aQ4FK66 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38aQ4FK66 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38aQ4FK66 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38aQ4FK66 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38aQ4FK66 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
Prpf38aQ4FK66 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38aQ4FK66 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38aQ4FK66 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.97■□□□□ 0.95
Prpf38aQ4FK66 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38aQ4FK66 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38aQ4FK66 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Prpf38aQ4FK66 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Prpf38aQ4FK66 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms