Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Mir1668-201ENSMUST00000184114 107 ntBASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam196aQ3USH1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Fam196aQ3USH1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Fam196aQ3USH1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam196aQ3USH1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam196aQ3USH1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Fam196aQ3USH1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam196aQ3USH1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Fam196aQ3USH1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam196aQ3USH1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Gm27357-201ENSMUST00000183754 135 ntBASIC18.07■□□□□ 0.48
Fam196aQ3USH1 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam196aQ3USH1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam196aQ3USH1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Gm28659-201ENSMUST00000188013 759 ntBASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Gm4974-201ENSMUST00000209974 875 ntBASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Gm7370-201ENSMUST00000219471 767 ntBASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam196aQ3USH1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Gm11950-201ENSMUST00000121615 838 ntBASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fam196aQ3USH1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Fam196aQ3USH1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Fam196aQ3USH1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Fam196aQ3USH1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms