Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Mir7071-201ENSMUST00000184847 69 ntBASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Gm43183-201ENSMUST00000200632 547 ntBASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Gm42545-201ENSMUST00000202755 922 ntBASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.27■□□□□ 0.52
Naf1Q3UMQ8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Naf1Q3UMQ8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Naf1Q3UMQ8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Naf1Q3UMQ8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Naf1Q3UMQ8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Gm37055-201ENSMUST00000191866 133 ntBASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Naf1Q3UMQ8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Gm37292-201ENSMUST00000192062 758 ntBASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Naf1Q3UMQ8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.23■□□□□ 0.51
Naf1Q3UMQ8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms