Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.32■□□□□ 0.68
Smcr8Q3UMB5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Gm10138-203ENSMUST00000206952 366 ntBASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smcr8Q3UMB5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Gm38285-201ENSMUST00000192928 922 ntBASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smcr8Q3UMB5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Gm37055-201ENSMUST00000191866 133 ntBASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smcr8Q3UMB5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.28■□□□□ 0.68
Smcr8Q3UMB5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smcr8Q3UMB5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms