Protein–RNA interactions for Protein: Q3ULM0

Ccdc106, Coiled-coil domain-containing protein 106, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc106Q3ULM0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc106Q3ULM0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.57■□□□□ 0.24
Ccdc106Q3ULM0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Rab3c-203ENSMUST00000224180 967 ntBASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc106Q3ULM0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Gm13168-201ENSMUST00000121771 632 ntBASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Gm8520-201ENSMUST00000186517 868 ntBASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Gm26524-201ENSMUST00000192339 390 ntBASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Ccdc106Q3ULM0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Trmt13-210ENSMUST00000198454 880 ntBASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc106Q3ULM0 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Gm37856-201ENSMUST00000191634 999 ntBASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc106Q3ULM0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms