Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc61Q3UJV1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc61Q3UJV1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc61Q3UJV1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc61Q3UJV1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc61Q3UJV1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc61Q3UJV1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc61Q3UJV1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Gm37292-201ENSMUST00000192062 758 ntBASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc61Q3UJV1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Tgds-204ENSMUST00000228543 1594 ntBASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Mir2861-201ENSMUST00000175539 82 ntBASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc61Q3UJV1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Ccdc61Q3UJV1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc61Q3UJV1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Golph3-205ENSMUST00000228671 2842 ntBASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc61Q3UJV1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc61Q3UJV1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Mir7071-201ENSMUST00000184847 69 ntBASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc61Q3UJV1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Gm12382-201ENSMUST00000122005 922 ntBASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc61Q3UJV1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc61Q3UJV1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms