Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Snx27Q3UHD6 Gm21814-202ENSMUST00000203277 873 ntBASIC19.49■□□□□ 0.71
Snx27Q3UHD6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Snx27Q3UHD6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Snx27Q3UHD6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Snx27Q3UHD6 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.49■□□□□ 0.71
Snx27Q3UHD6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.49■□□□□ 0.71
Snx27Q3UHD6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Snx27Q3UHD6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Snx27Q3UHD6 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.48■□□□□ 0.71
Snx27Q3UHD6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Snx27Q3UHD6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Snx27Q3UHD6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.48■□□□□ 0.71
Snx27Q3UHD6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.48■□□□□ 0.71
Snx27Q3UHD6 Gm5417-201ENSMUST00000079706 384 ntBASIC19.48■□□□□ 0.71
Snx27Q3UHD6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Snx27Q3UHD6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.47■□□□□ 0.71
Snx27Q3UHD6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snx27Q3UHD6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Snx27Q3UHD6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snx27Q3UHD6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Gm11643-201ENSMUST00000119578 864 ntBASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx27Q3UHD6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx27Q3UHD6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Timm23-208ENSMUST00000226683 750 ntBASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Odf3b-204ENSMUST00000227834 930 ntBASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms