Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdnep1Q3TP92 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.84■□□□□ 0.93
Ctdnep1Q3TP92 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdnep1Q3TP92 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdnep1Q3TP92 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ctdnep1Q3TP92 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Zfp783-201ENSMUST00000095946 670 ntBASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.83■□□□□ 0.93
Ctdnep1Q3TP92 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.83■□□□□ 0.92
Ctdnep1Q3TP92 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ctdnep1Q3TP92 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ctdnep1Q3TP92 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ctdnep1Q3TP92 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ctdnep1Q3TP92 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ctdnep1Q3TP92 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ctdnep1Q3TP92 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ctdnep1Q3TP92 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ctdnep1Q3TP92 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctdnep1Q3TP92 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms