Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Gm27742-201ENSMUST00000184667 60 ntBASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Gm11355-201ENSMUST00000121120 306 ntBASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Gm28659-201ENSMUST00000188013 759 ntBASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col19a1Q0VF58 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col19a1Q0VF58 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col19a1Q0VF58 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.27■□□□□ 0.68
Col19a1Q0VF58 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.27■□□□□ 0.68
Col19a1Q0VF58 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Col19a1Q0VF58 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col19a1Q0VF58 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.27■□□□□ 0.68
Col19a1Q0VF58 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Col19a1Q0VF58 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col19a1Q0VF58 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col19a1Q0VF58 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col19a1Q0VF58 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col19a1Q0VF58 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col19a1Q0VF58 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col19a1Q0VF58 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.23■□□□□ 0.67
Col19a1Q0VF58 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col19a1Q0VF58 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col19a1Q0VF58 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col19a1Q0VF58 Gm13884-201ENSMUST00000118103 829 ntBASIC19.23■□□□□ 0.67
Col19a1Q0VF58 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.23■□□□□ 0.67
Col19a1Q0VF58 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.23■□□□□ 0.67
Col19a1Q0VF58 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Col19a1Q0VF58 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col19a1Q0VF58 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col19a1Q0VF58 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms