Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Gm7213-201ENSMUST00000215977 950 ntBASIC16.19■□□□□ 0.18
Chd8Q09XV5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.18■□□□□ 0.18
Chd8Q09XV5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd8Q09XV5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.17■□□□□ 0.18
Chd8Q09XV5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Gm26039-201ENSMUST00000158152 144 ntBASIC16.17■□□□□ 0.18
Chd8Q09XV5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Gm7862-201ENSMUST00000121461 292 ntBASIC16.17■□□□□ 0.18
Chd8Q09XV5 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.17■□□□□ 0.18
Chd8Q09XV5 Gm6376-201ENSMUST00000209407 580 ntBASIC16.17■□□□□ 0.18
Chd8Q09XV5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd8Q09XV5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd8Q09XV5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd8Q09XV5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd8Q09XV5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd8Q09XV5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Chd8Q09XV5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.16■□□□□ 0.18
Chd8Q09XV5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chd8Q09XV5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd8Q09XV5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd8Q09XV5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd8Q09XV5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd8Q09XV5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Gm7638-201ENSMUST00000121348 967 ntBASIC16.15■□□□□ 0.18
Chd8Q09XV5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Gm27397-201ENSMUST00000184997 107 ntBASIC16.15■□□□□ 0.18
Chd8Q09XV5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd8Q09XV5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.14■□□□□ 0.17
Chd8Q09XV5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.14■□□□□ 0.17
Chd8Q09XV5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd8Q09XV5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd8Q09XV5 Gm14494-201ENSMUST00000118786 435 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms