Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx4Q07424 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx4Q07424 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx4Q07424 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdx4Q07424 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdx4Q07424 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdx4Q07424 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Grk6-206ENSMUST00000224995 2971 ntBASIC13.91□□□□□ -0.18
Cdx4Q07424 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx4Q07424 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.9□□□□□ -0.18
Cdx4Q07424 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cdx4Q07424 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cdx4Q07424 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Cdx4Q07424 Gm6211-202ENSMUST00000167849 925 ntBASIC13.9□□□□□ -0.18
Cdx4Q07424 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.9□□□□□ -0.18
Cdx4Q07424 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.9□□□□□ -0.18
Cdx4Q07424 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdx4Q07424 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.9□□□□□ -0.18
Cdx4Q07424 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx4Q07424 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Cdx4Q07424 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdx4Q07424 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.89□□□□□ -0.19
Cdx4Q07424 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdx4Q07424 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdx4Q07424 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdx4Q07424 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.89□□□□□ -0.19
Cdx4Q07424 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.89□□□□□ -0.19
Cdx4Q07424 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cdx4Q07424 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx4Q07424 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cdx4Q07424 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Gm4968-201ENSMUST00000071458 858 ntBASIC13.88□□□□□ -0.19
Cdx4Q07424 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cdx4Q07424 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Cdx4Q07424 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx4Q07424 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.87□□□□□ -0.19
Cdx4Q07424 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cdx4Q07424 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.87□□□□□ -0.19
Cdx4Q07424 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.87□□□□□ -0.19
Cdx4Q07424 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.87□□□□□ -0.19
Cdx4Q07424 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms