Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox4Q06831 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sox4Q06831 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox4Q06831 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sox4Q06831 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox4Q06831 Tgds-204ENSMUST00000228543 1594 ntBASIC17.67■□□□□ 0.42
Sox4Q06831 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox4Q06831 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sox4Q06831 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.67■□□□□ 0.42
Sox4Q06831 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox4Q06831 Gm18666-201ENSMUST00000190039 958 ntBASIC17.67■□□□□ 0.42
Sox4Q06831 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox4Q06831 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox4Q06831 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.67■□□□□ 0.42
Sox4Q06831 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sox4Q06831 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox4Q06831 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox4Q06831 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox4Q06831 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox4Q06831 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox4Q06831 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.66■□□□□ 0.42
Sox4Q06831 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.66■□□□□ 0.42
Sox4Q06831 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox4Q06831 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Sox4Q06831 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox4Q06831 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox4Q06831 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.65■□□□□ 0.42
Sox4Q06831 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.65■□□□□ 0.42
Sox4Q06831 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Sox4Q06831 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox4Q06831 Fst-202ENSMUST00000223640 2612 ntBASIC17.65■□□□□ 0.42
Sox4Q06831 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sox4Q06831 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sox4Q06831 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.64■□□□□ 0.42
Sox4Q06831 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox4Q06831 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Sox4Q06831 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.64■□□□□ 0.41
Sox4Q06831 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sox4Q06831 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox4Q06831 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.64■□□□□ 0.41
Sox4Q06831 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.64■□□□□ 0.41
Sox4Q06831 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sox4Q06831 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.64■□□□□ 0.41
Sox4Q06831 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.64■□□□□ 0.41
Sox4Q06831 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.64■□□□□ 0.41
Sox4Q06831 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox4Q06831 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox4Q06831 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Sox4Q06831 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox4Q06831 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox4Q06831 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.63■□□□□ 0.41
Sox4Q06831 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.63■□□□□ 0.41
Sox4Q06831 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox4Q06831 Gm10138-203ENSMUST00000206952 366 ntBASIC17.63■□□□□ 0.41
Sox4Q06831 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox4Q06831 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox4Q06831 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox4Q06831 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Sox4Q06831 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox4Q06831 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sox4Q06831 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Sox4Q06831 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.62■□□□□ 0.41
Sox4Q06831 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.62■□□□□ 0.41
Sox4Q06831 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.62■□□□□ 0.41
Sox4Q06831 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.62■□□□□ 0.41
Sox4Q06831 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox4Q06831 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox4Q06831 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Sox4Q06831 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox4Q06831 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox4Q06831 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox4Q06831 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Sox4Q06831 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Gm10698-201ENSMUST00000182663 604 ntBASIC17.61■□□□□ 0.41
Sox4Q06831 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox4Q06831 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sox4Q06831 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox4Q06831 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox4Q06831 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
Sox4Q06831 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox4Q06831 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms