Protein–RNA interactions for Protein: Q01405

Sec23a, Protein transport protein Sec23A, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec23aQ01405 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.71■□□□□ 0.91
Sec23aQ01405 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sec23aQ01405 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.71■□□□□ 0.91
Sec23aQ01405 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sec23aQ01405 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sec23aQ01405 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sec23aQ01405 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec23aQ01405 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.7■□□□□ 0.9
Sec23aQ01405 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec23aQ01405 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec23aQ01405 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sec23aQ01405 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec23aQ01405 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec23aQ01405 Gm37292-201ENSMUST00000192062 758 ntBASIC20.7■□□□□ 0.9
Sec23aQ01405 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec23aQ01405 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec23aQ01405 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.69■□□□□ 0.9
Sec23aQ01405 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
Sec23aQ01405 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Sec23aQ01405 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sec23aQ01405 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.68■□□□□ 0.9
Sec23aQ01405 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sec23aQ01405 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sec23aQ01405 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sec23aQ01405 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sec23aQ01405 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sec23aQ01405 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sec23aQ01405 Gm43183-201ENSMUST00000200632 547 ntBASIC20.68■□□□□ 0.9
Sec23aQ01405 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.68■□□□□ 0.9
Sec23aQ01405 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.68■□□□□ 0.9
Sec23aQ01405 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.68■□□□□ 0.9
Sec23aQ01405 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sec23aQ01405 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sec23aQ01405 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sec23aQ01405 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sec23aQ01405 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sec23aQ01405 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec23aQ01405 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec23aQ01405 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Sec23aQ01405 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec23aQ01405 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec23aQ01405 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sec23aQ01405 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sec23aQ01405 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.67■□□□□ 0.9
Sec23aQ01405 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec23aQ01405 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec23aQ01405 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec23aQ01405 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sec23aQ01405 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sec23aQ01405 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sec23aQ01405 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sec23aQ01405 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sec23aQ01405 Gm10812-201ENSMUST00000099864 546 ntBASIC20.66■□□□□ 0.9
Sec23aQ01405 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sec23aQ01405 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sec23aQ01405 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sec23aQ01405 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sec23aQ01405 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.66■□□□□ 0.9
Sec23aQ01405 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.66■□□□□ 0.9
Sec23aQ01405 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sec23aQ01405 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sec23aQ01405 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Sec23aQ01405 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.65■□□□□ 0.9
Sec23aQ01405 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.65■□□□□ 0.9
Sec23aQ01405 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.65■□□□□ 0.9
Sec23aQ01405 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec23aQ01405 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sec23aQ01405 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sec23aQ01405 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.64■□□□□ 0.89
Sec23aQ01405 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sec23aQ01405 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sec23aQ01405 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms